BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G06SP1|AL428607
(849 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1043 593 e-169
3x_Contig630 491 e-139
>3x_Contig1043
Length = 5132
Score = 593 bits (292), Expect = e-169
Identities = 517/624 (82%)
Strand = Plus / Plus
Query: 226 gcttgttactcgtgccgctagtccacaattttgtgagacttcaatcatcagtmacctgta 285
|||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 1 gcttgttactcgagccgctagtccacaattctgtgagacttcaatcatcagtaacctgta 60
Query: 286 cttttmaccggttgcctaacagctcacagaagacaaaatgamatattatgtcatgcmcta 345
||||| ||||||||||||| ||||||||||||||||||||| ||||||||| |||| |||
Sbjct: 61 cttttaaccggttgcctaaaagctcacagaagacaaaatgaaatattatgtaatgcacta 120
Query: 346 tgttcccaaamaggtatatcttttcgtacttgtgamaacttagcattcagtmagctcgnn 405
|||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||
Sbjct: 121 tgttcccaaaaaggtatatcttttcgtacttgtgaaaacttagcattcagtaagctcgaa 180
Query: 406 tntttcccagntnaammcmaaamatcgntcnccaaagacttttygactcacaagttntcn 465
| ||||| || | || | ||| |||| || | ||||| |||| || ||||||||| ||
Sbjct: 181 tatttccaagataaaaacaaaaaatcgatcacaaaagaattttagaatcacaagttatca 240
Query: 466 gtccnttcncnctntntctctygtyytccccccatggggtaggtggcccggccnttgtct 525
|||| ||| | || | | | | || |||||||||| |||| |||||||||| |||| |
Sbjct: 241 gtccattcacactatatatatagttatccccccatgaggtaagtggcccggcaattgtat 300
Query: 526 tntctttytyyyyttttcgttttttccggttcgggtgctagccgggtccaamtcgccctc 585
| ||||| | ||||||||| ||||| |||| ||||||| |||||||| |||| |||
Sbjct: 301 tatctttttttttttttcgtttattccgattcgaatgctagcagggtccaaatcgcactc 360
Query: 586 cccccatatgtcacccgnnccngngngncttgcntntctccttntytngntgcntncntn 645
| | |||||| | ||| || | | | ||||| | ||| ||| | | | ||| | | |
Sbjct: 361 acacaatatgtaaaccgaaccagagagacttgcatatctacttatatagatgcatacata 420
Query: 646 ntcntnccccncncctntncccctctctctttcttncntcntttncncgcnnnnncttnn 705
|| | |||| | ||| | |||||||||||||||| | || || | ||| |||
Sbjct: 421 atcatacccctctcctatacccctctctctttcttacatcattaacacgcatagtcttgt 480
Query: 706 cnnntcnnctttntctcgaatttcacaaggtttgcctgcgwtgctgtggattttccttgg 765
| || |||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 481 caaatcaactttatctcgaatttcacaaggtttgcctgcgttgctgtggattttccttgg 540
Query: 766 ctttcattcctgtgtgtccgtttctggtcgtggttcctcttttgatagataaaaaamagg 825
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 541 ctttcattcctgtgtgtccgtttctggtcgtggttcctcttttgatagataaaaaacagg 600
Query: 826 cgaaaatcagtgggagtcggaaaa 849
||||||||||||||||||||||||
Sbjct: 601 cgaaaatcagtgggagtcggaaaa 624
>3x_Contig630
Length = 2537
Score = 491 bits (242), Expect = e-139
Identities = 248/253 (98%)
Strand = Plus / Plus
Query: 1 atccttccaatcacctgtccgaaattttttctatttttacttacataggcgtaattgtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 atccttccaatcacctgtccgaaattttttctatttttacttacataggcgtaattgtta 2344
Query: 61 ttaacgtaaggaaaacattctttccaatcccgaccgttattaatgcatttacgttcgaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 ttaacgtaaggaaaacattctttccaatcccgaccgttattaatgcatttacgttcgaag 2404
Query: 121 gctttttgctccttctagaaaamagtttaamaccttaatacttgamagaggaacacacaa 180
|||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||
Sbjct: 2405 gctttttgctccttctagaaaaaagtttaaaaccttaatacttgaaagaggaacacacaa 2464
Query: 181 aaaaaaacaatggccaaacacctgcgcttagtatggraaagatgggcttgttactcgtgc 240
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 2465 aanaaaacaatggccaaacacctgcgcttagtatggaaaagatgggcttgttactcgtgc 2524
Query: 241 cgctagtccacaa 253
|||||||||||||
Sbjct: 2525 cgctagtccacaa 2537
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3513
Number of Sequences: 1807
Number of extensions: 3513
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 2
length of query: 849
length of database: 10,358,551
effective HSP length: 16
effective length of query: 833
effective length of database: 10,329,639
effective search space: 8604589287
effective search space used: 8604589287
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)